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Shinya Yamamoto

Yamamoto

Shinya Yamamoto, D.V.M., Ph.D.

Associate Professor

(832) 824-8119

Positions

Associate Professor
Department of Molecular & Human Genetics (primary) and Department of Neuroscience (secondary)
ÌÇÐÄÊÓÆµ of Medicine
Houston, Texas, United States
Associate Director
Genetics & Genomics Graduate Program, Graduate School of Biomedical Sciences, ÌÇÐÄÊÓÆµ of Medicine
Investigator
Jan and Dan Duncan Neurological Research Institute (NRI)
Texas Children's Hospital
Houston, Texas, United States
Co-Director, Drosophila Core
Model Organisms Screening Center (MOSC) for the Undiagnosed Diseases Network (UDN)
SFARI Investigator
Simons Foundation Autism Research Initiative (SFARI)
Co-Chair of Steering and Executive Committees
Undiagnosed Diseases Network

Addresses

Jan and Dan Duncan Neurological Research Institute (Office)
1250 Moursund St.
NRI-1025.12
Houston, TX, 77030
United States
Phone: (832) 824-8119
yamamoto@bcm.edu

Education

BS from University of Tokyo
03/2005 - Tokyo, Japan
DVM from Ministry of Agriculture, Forestry and Fisheries of Japan
04/2005 - Tokyo, Japan
PhD from ÌÇÐÄÊÓÆµ of Medicine
03/2012 - Houston, Texas, United States
Post-Doctoral Fellowship at ÌÇÐÄÊÓÆµ of Medicine
12/2013 - Houston, Texas, United States

Professional Interests

  • Integration of Drosophila Genetics and Human Genomics
  • New Disease Gene Discovery
  • Drosophila Technology and Resource Development
  • Cell-Cell Communication in Development and Disease
  • Facilitation of the Use of Model Organisms in Human Disease Diagnosis and Research
  • Bioinformatic Tool Development

Professional Statement

Many projects in the Yamamoto lab are related to rare and undiagnosed diseases. In fact, >25 million individuals are affected by rare or ultra-rare diseases in the US alone, and many experience a long and winding 'diagnostic odyssey' to try to find out the cause of their disorders. While state-of-the-art sequencing technologies such as whole-exome sequencing (WES) and whole-genome sequencing (WGS) may provide an answer to a subset of these individuals, many are left with a handful of candidate genetic variants that require experimental studies to understand their functional consequences. As a member of the Undiagnosed Diseases Network (UDN) Model Organisms Screening Center (MOSC) and BCM Center for Precision Medicine Models (CPMM), we utilize Drosophila to test whether a genetic variant(s) identified in a patient is the cause of their disease, which is pursued in close collaboration with clinicians and human geneticists across the country and abroad. I am also involved in development of novel computational tools such as MARRVEL and ModelMatcher with bioinformaticians and programmers to facilitate rare disease diagnosis and research.

Over the years, my interest has expanded to include more common neurological disorders such as autism spectrum disorders (ASD), Alzheimer's disease, psychiatric diseases, and drug addiction. More recently, we are also developing creative strategies to study infectious diseases such as Zika virus mediated microcephaly and COVID-19, given their socioeconomic importance. In summary, while members of my lab and I work on diverse research topics, all projects are built on a common foundation that harness the 'awesome power of fly genetics'.

Selected Publications

  • Yamamoto S*, Jaiswal M*, Charng WL, Gambin T, Karaca E, Mirzaa G, Wiszniewski W, Sandoval H, Haelterman NA, Xiong B, Zhang K, Bayat V, David G, Li T, Chen K, Gala U, Harel T, Pehlivan D, Penney S, Vissers LE, de Ligt J et al. (* Equal Contribution). " " Cell. 2014 Sep 25; 159 (1) : 200-214.
    Pubmed PMID: .
  • Yamamoto S, Charng WL, Rana NA, Kakuda S, Jaiswal M, Bayat V, Xiong B, Zhang K, Sandoval H, David G, Wang H, Haltiwanger RS, Bellen HJ. " " Science. 2012 Nov 30; 338 (6111) : 1229-32.
    Pubmed PMID: .
  • Bellen HJ, Yamamoto S. " " Cell. 2015 Sep 24; 163 (1) : 12-14.
    Pubmed PMID: .
  • Marcogliese PC*, Deal SL*, Andrews J*, Harnish JM*, Bhavana VH, Graves HK, Jangam S, ..., Rosenfeld JA, Marom R, Wangler MF#, Yamamoto S# (*Equal Contribution, #Co-Corresponding Authors). " " Cell Rep. 2022 Mar 15; 38 (11) : 110517.
    Pubmed PMID: .

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