Positions
- Professor
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Molecular and Human Genetics
ÌÇÐÄÊÓƵ of Medicine
Houston, TX, US
- Member
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Dan L Duncan Comprehensive Cancer Center
ÌÇÐÄÊÓƵ of Medicine
Houston, Texas, United States
Education
- BA from University Of Cambridge
- 01/1962 - Cambridge, United Kingdom
- PhD from University Of Cambridge
- 01/1965 - Cambridge, United Kingdom
- Post-Doctoral Fellowship at Harvard University
- 01/1965 - Cambridge, MA, United States
Professional Interests
- Mechanism of amplification and genome instability in Escherichia coli and human
Professional Statement
Part of my current work is on the genetic responses to stress in Escherichia coli. We have shown that gene amplification occurs in response to stress, and is, therefore, an adaptive process comparable to the well-known adaptive mutation response. We are using genetic and molecular techniques to elucidate the mechanism by which adaptive amplification occurs. Because this genetic instability would be part of an adaptive response, we expect to be able to induce it, and thus to study the processes by which genetic instability occurs. This might provide a model system in which to study the induction of chromosomal instability in oncogenesis (about 80 percent of cancers show chromosomal instability), and in evolution.
We have discovered that amplification is initiated by a template-switch mechanism during replication. By comparing our data to those derived from yeast and human cancer and genomic disease, we have derived a model for the origin of chromosomal structural changes for all organisms. This then suggests a mechanism for the origin of copy number variation (the major genetic difference between individuals) and for genomic disease. The model involves modification of the mechanism of replication fork repair occurring in cells experiencing a programmed stress-response. We are testing predictions of this model both in E. coli and in human.
We have discovered that amplification is initiated by a template-switch mechanism during replication. By comparing our data to those derived from yeast and human cancer and genomic disease, we have derived a model for the origin of chromosomal structural changes for all organisms. This then suggests a mechanism for the origin of copy number variation (the major genetic difference between individuals) and for genomic disease. The model involves modification of the mechanism of replication fork repair occurring in cells experiencing a programmed stress-response. We are testing predictions of this model both in E. coli and in human.
Selected Publications
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Liu P, Erez A, Nagamani SC, Dhar SU, Kolodziejska KE, Dharmadhikari AV, Cooper ML, Wiszniewska J, Zhang F, Withers MA, Bacino CA, Campos-Acevedo LD, Delgado MR, Freedenberg D, Garnica A, Grebe TA, Hernández-Almaguer D, Immken L, Lalani SR, McLean SD, Nort. " " Cell. 2011 Sep 16; 146 (6) : 889-903.
Pubmed PMID: . -
Al Mamun AA, Lombardo MJ, Shee C, Lisewski AM, Gonzalez C, Lin D, Nehring RB, Saint-Ruf C, Gibson JL, Frisch RL, Lichtarge O, Hastings PJ, Rosenberg SM. " " Science. 2012 Dec 7; 338 (6112) : 1344-8.
Pubmed PMID: . -
Beck CR, Carvalho CMB, Akdemir ZC, Sedlazeck FJ, Song X, (...), Hastings PJ, Lupski JR. " Megabase Length Hypermutation Accompanies Human Structural Variation at 17p11.2.. " Cell. 2019 ; 176 : 1310-1324.e10.
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Xia J, Chiu LY, Nehring RB, Bravo Núñez MA, Mei Q, (...), Hastings PJ, Bates D, Queitsch C, Hilsenbeck SG, Coarfa C, Hu JC, Siegele DA, Scott KL, Liang H, Mancini MA, Herman C, Miller KM, Rosenberg SM. " Bacteria-to-Human Protein Networks Reveal Origins of Endogenous DNA Damage.. " Cell. 2019 ; 176 : 127-143.e24..
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