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Hongjie Li

Li

Hongjie Li

Associate Professor

(713) 798-1873

Positions

Associate Professor
Huffington Center on Aging
Associate Professor
Department of Molecular and Human Genetics
Member
ÌÇÐÄÊÓÆµ of Medicine
Dan L Duncan Comprehensive Cancer Center
Graduate Program Faculty
Genetics & Genomics, DDMT, Neuroscience, Quantitative and Computational Biosciences (QCB)

Addresses

Alkek N910 (Lab)
1 Baylor Plaza
Houston, TX, 77030
United States

Education

Postdoctoral Training at Stanford University
12/2020 - Stanford (Liqun Luo lab), California, United States
PhD from University of Rochester & Buck Institute for Research on Aging
03/2016 - Rochester (Henri Jasper lab), United States

Professional Statement

Technology development of multi-omics: We have developed the first single-cell RNA sequencing platform in Drosophila neurons and glia for studying neural development (Cell 2017; Curr Biol. 2020). Recently, we developed a single-nucleus RNA-seq method in flies (eLife 2021) and applied it to the Fly Cell Atlas (Science 2022) and Aging Fly Cell Atlas (Science 2023), a large collaborative project aiming to get the transcriptomic map of the entire fly. We will continue developing and applying multi-omics technologies (transcriptomics, epigenomics and proteomics) and combine them with powerful fly genetic tools to study development, aging and diseases.

Anti-brain aging to increase healthy lifespan: Our long-term goal is to identify molecular and cellular mechanisms that contribute to brain aging, including glia-neuron interactions, systemic inflammatory signals and gut-brain interactions. We will apply single-cell sequencing and cell surface proteomics (Li J, Han S, Li H, et al. Cell 2020) to study glia-neuron interactions and inter-organ communications to understand brain aging. We will employ single-bacterium genomics to explore gut microbiota changes during aging and study how they contribute to brain aging.

Limiting age-triggered tumor initiation and growth: Age is the biggest risk factor for many types of cancers, including breast, prostate, lung and colorectal cancers (Dis Model Mech. 2016). A central goal of this project is to discover how aging triggers tumor onset in the regenerating intestine. We will use fly intestine as a discovery model to generate hypotheses that we will then test in mouse cancer models and human colon cancers, aiming to develop effective strategies for limiting age-related tumor initiation and growth.

Websites

Selected Publications

  • Park YJ, Lu TC, Jackson T, Goodman LD, Ran L, Chen J, Liang CY, Harrison E, Ko C, Chen X, Wang B, Hsu AL, Ochoa E, Bieniek KF, Yamamoto S, Zhu Y, Zheng H, Qi Y, Bellen HJ, Li H. " " Neuron. 2025 Jul ; 113 : 2065-2082.e8.
    Pubmed PMID: .
  • Gao SM, Qi Y, Zhang Q, Guan Y, Lee YT, Ding L, Wang L, Mohammed AS, Li H, Fu Y, Wang MC. " " Nat Aging. 2024 Jul ; 4 : 998-1013.
    Pubmed PMID: .
  • TC Lu*, M Brbić*, YJ Park, T Jackson, J Chen, SS Kolluru, Y Qi, NS Katheder, XT Cai, S Lee, YC Chen, N Auld, CY Liang, S Ding, D Welsch, S D’Souza, AO Pisco, RC Jones, J Leskovec, EC Lai, HJ Bellen, L Luo, H Jasper, SR Quake, H Li. " " Science. 2023 Jun ; 380 : eadg0934.
    Pubmed PMID: .
  • Xie Q, Brbic M, Horns F, Kolluru SS, Jones RJ, Li J, Reddy A, Xie A, Kohani S, Li Z, McLaughlin CN, Li T, Xu C, Vacek D, Luginbuhl DJ, Leskovec J, Quake SR, Luo L, Li H. " " eLife. 2021 Feb ; 10 : e63450.
    Pubmed PMID: .

Funding

DP2 (NIH Director's New Innovator Award)
NIH
U01AG086143
NIH
Cancer Prevention and Research Institute of Texas
CPRIT
Welch Foundation Award
Welch Foundation
Longevity Research Grant
Impetus Grants
Ted Nash Long Life Foundation
Ted Nash Foundation
R00 - Pathway to Independence Award
NIH
Hevolution/AFAR New Investigator Award
Hevolution/AFAR

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